Introduction

Biologists produce large data sets and are in demand of rich and simple web portals in which they can upload and analyze their files. Providing such tools requires to mask the complexity induced by the needed High Performance Computing (HPC) environment. The connection between interface and computing infrastructure is usually specific to each portal. With Jflow, we introduce a Workflow Management System (WMS), composed of jQuery plug-ins which can easily be embedded in any web application and a Python library providing all requested features to setup, run and monitor workflows.Jflow is available under the GNU General Public License (GPL) at http://bioinfo.genotoul.fr/jflow. The package is coming with full documentation, quick start and a running test portal.Jerome.Mariette@toulouse.inra.fr.

Publications

  1. Jflow: a workflow management system for web applications.
    Cite this
    Mariette J, Escudié F, Bardou P, Nabihoudine I, Noirot C, Trotard MS, Gaspin C, Klopp C, 2016-02-01 - Bioinformatics (Oxford, England)

Credits

  1. Jérôme Mariette
    Developer

    Plate-forme Bio-informatique Genotoul, INRA, France

  2. Frédéric Escudié
    Developer

    Plate-forme Bio-informatique Genotoul, INRA, France

  3. Philippe Bardou
    Developer

    Plate-forme SIGENAE, INRA, France

  4. Ibouniyamine Nabihoudine
    Developer

    Plate-forme Bio-informatique Genotoul, INRA, France

  5. Céline Noirot
    Developer

    Plate-forme Bio-informatique Genotoul, INRA, France

  6. Marie-Stéphane Trotard
    Developer

    Plate-forme Bio-informatique Genotoul, INRA, France

  7. Christine Gaspin
    Developer

    Plate-forme Bio-informatique Genotoul, INRA, France

  8. Christophe Klopp
    Investigator

    Plate-forme Bio-informatique Genotoul, INRA, France

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Summary
AccessionBT000208
Tool TypeApplication
Category
PlatformsLinux/Unix
Technologies
User InterfaceTerminal Command Line
Download Count0
Country/RegionFrance
Submitted ByChristophe Klopp