Introduction

Liquid-chromatography high-resolution mass spectrometry provides capability to measure >40,000 ions derived from metabolites in biologic samples. This presents challenges to confirm identities of known chemicals and delineate potential metabolic pathway associations of unidentified chemicals. We provide an R package for metabolic network analysis, MetabNet, to perform targeted metabolome-wide association study of specific metabolites to facilitate detection of their related metabolic pathways and network structures.

Publications

  1. MetabNet: An R Package for Metabolic Association Analysis of High-Resolution Metabolomics Data.
    Cite this
    Uppal K, Soltow QA, Promislow DE, Wachtman LM, Quyyumi AA, Jones DP, 2015-01-01 - Frontiers in bioengineering and biotechnology

Credits

  1. Karan Uppal
    Developer

    Division of Pulmonary Medicine, Department of Medicine, United States of America

  2. Quinlyn A Soltow
    Developer

    Division of Pulmonary Medicine, Department of Medicine, United States of America

  3. Daniel E L Promislow
    Developer

    Department of Pathology, University of Washington, United States of America

  4. Lynn M Wachtman
    Developer

    New England Primate Research Center, Harvard University, United States of America

  5. Arshed Ali Quyyumi
    Developer

    Division of Cardiology, Department of Medicine, United States of America

  6. Dean P Jones
    Investigator

    Division of Pulmonary Medicine, Department of Medicine, United States of America

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Summary
AccessionBT000243
Tool TypeApplication
Category
PlatformsLinux/Unix
TechnologiesR
User InterfaceTerminal Command Line
Download Count0
Country/RegionUnited States of America
Submitted ByDean P Jones