Introduction

SUMMARY: The accurate mass and time (AMT) tag approach is used for analysis of large scale experiments by combining information generated over multiple datasets and instrument types. The VIPER software package is one of the key components of the data processing pipeline and implements automated algorithms to discover LC-MS features, align and match these LC-MS features to a database of peptides previously identified in LC-MS/MS analyses, and identify and quantify pairs of isotopically labeled peptides. AVAILABILITY: VIPER may be downloaded free of charge at http://ncrr.pnl.gov/software/

Publications

  1. VIPER: an advanced software package to support high-throughput LC-MS peptide identification.
    Cite this
    Monroe ME, Tolić N, Jaitly N, Shaw JL, Adkins JN, Smith RD, 2007-08-01 - Bioinformatics (Oxford, England)

Credits

  1. Matthew E Monroe
    Developer

  2. Nikola Tolić
    Developer

  3. Navdeep Jaitly
    Developer

  4. Jason L Shaw
    Developer

  5. Joshua N Adkins
    Developer

  6. Richard D Smith
    Investigator

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Summary
AccessionBT002376
Tool TypeApplication
Category
PlatformsWindows
Technologies
User InterfaceTerminal Command Line
Download Count0
Submitted ByRichard D Smith