Introduction

LipidXplorer is the open source software that supports the quantitative characterization of complex lipidomes by interpreting large datasets of shotgun mass spectra. LipidXplorer processes spectra acquired on any type of tandem mass spectrometers; it identifies and quantifies molecular species of any ionizable lipid class by considering any known or assumed molecular fragmentation pathway independently of any resource of reference mass spectra. It also supports any shotgun profiling routine, from high throughput top-down screening for molecular diagnostic and biomarker discovery to the targeted absolute quantification of low abundant lipid species. Full documentation on installation and operation of LipidXplorer, including tutorial, collection of spectra interpretation scripts, FAQ and user forum are available through the wiki site at: https://wiki.mpi-cbg.de/wiki/lipidx/index.php/Main_Page.

Publications

  1. LipidXplorer: a software for consensual cross-platform lipidomics.
    Cite this
    Herzog R, Schuhmann K, Schwudke D, Sampaio JL, Bornstein SR, Schroeder M, Shevchenko A, 2012-01-01 - PloS one

Credits

  1. Ronny Herzog
    Developer

    Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany

  2. Kai Schuhmann
    Developer

  3. Dominik Schwudke
    Developer

  4. Julio L Sampaio
    Developer

  5. Stefan R Bornstein
    Developer

  6. Michael Schroeder
    Developer

  7. Andrej Shevchenko
    Investigator

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Summary
AccessionBT003919
Tool TypeApplication
Category
PlatformsWindows
Technologies
User InterfaceTerminal Command Line
Download Count0
Submitted ByAndrej Shevchenko