Introduction

High throughput sequencing technologies generate large amounts of short reads. Mapping these to a reference sequence consumes large amounts of processing time and memory, and read mapping errors can lead to noisy or incorrect alignments. SNP-o-matic is a fast, memory-efficient and stringent read mapping tool offering a variety of analytical output functions, with an emphasis on genotyping.http://snpomatic.sourceforge.net.

Publications

  1. SNP-o-matic.
    Cite this
    Manske HM, Kwiatkowski DP, 2009-09-01 - Bioinformatics (Oxford, England)

Credits

  1. Heinrich Magnus Manske
    Developer

    Wellcome Trust Sanger Institute, Hinxton, Germany

  2. Dominic P Kwiatkowski
    Investigator

Community Ratings

UsabilityEfficiencyReliabilityRated By
0 user
Sign in to rate
Summary
AccessionBT005630
Tool TypeApplication
Category
PlatformsLinux/Unix
TechnologiesC, C++
User InterfaceTerminal Command Line
Download Count0
Submitted ByDominic P Kwiatkowski