Introduction

The Freiburg RNA tools web server integrates three tools for the advanced analysis of RNA in a common web-based user interface. The tools IntaRNA, ExpaRNA and LocARNA support the prediction of RNA-RNA interaction, exact RNA matching and alignment of RNA, respectively. The Freiburg RNA tools web server and the software packages of the stand-alone tools are freely accessible at http://rna.informatik.uni-freiburg.de.

Publications

  1. Freiburg RNA Tools: a web server integrating INTARNA, EXPARNA and LOCARNA.
    Cite this
    Smith C, Heyne S, Richter AS, Will S, Backofen R, 2010-07-01 - Nucleic acids research
  2. LocARNA-P: accurate boundary prediction and improved detection of structural RNAs.
    Cite this
    Will S, Joshi T, Hofacker IL, Stadler PF, Backofen R, 2012-05-01 - RNA (New York, N.Y.)
  3. Inferring noncoding RNA families and classes by means of genome-scale structure-based clustering.
    Cite this
    Will S, Reiche K, Hofacker IL, Stadler PF, Backofen R, 2007-04-01 - PLoS computational biology

Credits

  1. Cameron Smith
    Developer

  2. Steffen Heyne
    Developer

  3. Andreas S Richter
    Developer

  4. Sebastian Will
    Developer

  5. Rolf Backofen
    Investigator

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Summary
AccessionBT006562
Tool TypeApplication
Category
PlatformsLinux/Unix
TechnologiesC++
User InterfaceTerminal Command Line
Download Count0
Submitted ByRolf Backofen