Introduction

MOTIVATION: BUCKy is a C++ program that implements Bayesian concordance analysis. The method uses a non-parametric clustering of genes with compatible trees, and reconstructs the primary concordance tree from clades supported by the largest proportions of genes. A population tree with branch lengths in coalescent units is estimated from quartet concordance factors. AVAILABILITY: BUCKy is open source and distributed under the GNU general public license at www.stat.wisc.edu/∼ane/bucky/.

Publications

  1. BUCKy: gene tree/species tree reconciliation with Bayesian concordance analysis.
    Cite this
    Larget BR, Kotha SK, Dewey CN, Ané C, 2010-11-01 - Bioinformatics (Oxford, England)

Credits

  1. Bret R Larget
    Developer

  2. Satish K Kotha
    Developer

  3. Colin N Dewey
    Developer

  4. Cécile Ané
    Investigator

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Summary
AccessionBT006960
Tool TypeApplication
Category
PlatformsLinux/Unix
TechnologiesC++
User InterfaceTerminal Command Line
Download Count0
Submitted ByCécile Ané