HPC-Atlas Computationally Constructing A Comprehensive Atlas of Human Protein Complexes

Introduction

A comprehensive atlas of human protein complexes can provide an avenue to better understand the core functions in human cells, which were carried out by multiple proteins forming complexes.

We developed a new computational framework to identify protein complexes by expanding and integrating two latest protein interaction networks, which resulted in the identification of nearly 9000 complexes.

Our atlas (HPC-Atlas) provides not only a computational framework for identifying biologically meaningful protein complexes, but also a valuable resource for researchers across a broad range of interests including systems biology, structural biology, and molecular explanations of disease.

Publications

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Credits

  1. Yuliang Pan yuliangpan@tongji.edu.cn
    Investigator

    Department of Computer Science & Technology, Tongji University, China

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yul***n@tongji.edu.cn (April 10, 2023)
Summary
AccessionBT007355
Tool TypeFramework
CategoryBiological network reconstruction
PlatformsLinux/Unix, MAC OS X, Windows
TechnologiesPython2, Python3
User InterfaceTerminal Command Line
Latest Release1.0 (April 10, 2023)
Download Count363
Country/RegionChina
Submitted ByYuliang Pan
Fundings

This work was supported by the National Natural Science Foundation of China (Grant Nos. 61972100 and 62172300).