LOCUS UOX08682 4404 aa linear VRL 15-APR-2022 DEFINITION ORF1a polyprotein [Severe acute respiratory syndrome coronavirus 2]. ACCESSION UOX08682 VERSION UOX08682.1 KEYWORDS . SOURCE Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ORGANISM Severe acute respiratory syndrome coronavirus 2 Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus. DBSOURCE accession ON241680.1 REFERENCE 1 (residues 1 to 4404) AUTHORS Souza,T.M.L., Kuriyama,S.N., Gesto,J.S.M., Farjun,B., Cabanelas,A. and Fidalgo-Neto,A. TITLE Implemented occupational health surveillance limits the spread of SARS-CoV-2 Omicron at the workplace JOURNAL Unpublished REFERENCE 2 (residues 1 to 4404) AUTHORS Souza,T.M.L., Kuriyama,S.N., Gesto,J.S.M., Farjun,B., Cabanelas,A. and Fidalgo-Neto,A. TITLE Direct Submission JOURNAL Submitted (14-APR-2022) CIS-SO, Firjan SESI, Rua Morais e Silva, 53 - bloco 9, Rio de Janeiro, RJ 20271-031, Brazil COMMENT Method: conceptual translation. FEATURES Location/Qualifiers source 1..4404 /organism="Severe acute respiratory syndrome coronavirus 2" /isolate="SARS-CoV-2/human/BRA/CBT-0701-003/2022" /isolation_source="nasal swab" /host="Homo sapiens" /db_xref="taxon:2697049" /country="Brazil: Rio de Janeiro" /collection_date="2022-01-07" Protein 1..4404 /product="ORF1a polyprotein" mat_peptide 1..180 /product="leader protein" mat_peptide 181..818 /product="nsp2" mat_peptide 819..2762 /product="nsp3" mat_peptide 2763..3262 /product="nsp4" mat_peptide 3263..3568 /product="3C-like proteinase" mat_peptide 3569..3858 /product="nsp6" mat_peptide 3859..3941 /product="nsp7" mat_peptide 3942..4139 /product="nsp8" mat_peptide 4140..4252 /product="nsp9" mat_peptide 4253..4391 /product="nsp10" mat_peptide 4392..4404 /product="nsp11" CDS 1..4404 /gene="ORF1ab" /coded_by="ON241680.1:1..13215" ORIGIN 1 meslvpgfne kthvqlslpv lqvrdvlvrg fgdsveevls earqhlkdgt cglvevekgv 61 lpqleqpyvf ikrsdartap hghvmvelva elegiqygrs getlgvlvph vgeipvayrk 121 vllrkngnkg agghsygadl ksfdlgdelg tdpyedfqen wntkhssgvt relmrelngg 181 aytryvdnnf cgpdgyplec ikdllaragk asctlseqld fidtkrgvyc creheheiaw 241 yterseksye lqtpfeikla kkfdtfngec pnfvfplnsi iktiqprvek kkldgfmgri 301 rsvypvaspn ecnqmclstl mkcdhcgets wqtgdfvkat cefcgtenlt kegattcgyl 361 pqnavvkiyc pachnsevgp ehslaeyhne sglktilrkg grtiafggcv fsyvgchnkc 421 aywvprasan igcnhtgvvg egseglndnl leilqkekvn inivgdfkln eeiaiilasf 481 sastsafvet vkgldykafk qivescgnfk vtkgkakkga wnigeqksil splyafasea 541 arvvrsifsr tletaqnsvr vlqkaaitil dgisqyslrl idammftsdl atnnlvvmay 601 itggvvqlts qwltnifgtv yeklkpvldw leekfkegve flrdgweivk fistcaceiv 661 ggqivtcake ikesvqtffk lvnkflalca dsiiiggakl kalnlgetfv thskglyrkc 721 vksreetgll mplkapkeii flegetlpte vlteevvlkt gdlqpleqpt seaveaplvg 781 tpvcinglml leikdtekyc alapnmmvtn ntftlkggap tkvtfgddtv ievqgyksvn 841 itfelderid kvlnercsay tvelgtevne facvvadavi ktlqpvsell tplgidldew 901 smatyylfde sgefklashm ycsfyppded eeegdceeee fepstqyeyg teddyqgkpl 961 efgatsaalq peeeqeedwl dddsqqtvgq qdgsednqtt tiqtivevqp qlemeltpvv 1021 qtievnsfsg ylkltdnvyi knadiveeak kvkptvvvna anvylkhggg vagalnkatn 1081 namqvesddy iatngplkvg gscvlsghnl akhclhvvgp nvnkgediql lksayenfnq 1141 hevllaplls agifgadpih slrvcvdtvr tnvylavfdk nlydklvssf lemksekqve 1201 qkiaeipkee vkpfiteskp sveqrkqddk kikacveevt ttleetkflt enlllyidin 1261 gnlhpdsatl vsdiditflk kdapyivgdv vqegvltavv iptkkaggtt emlakalrkv 1321 ptdnyittyp gqglngytve eaktvlkkck safyilpsii snekqeilgt vswnlremla 1381 haeetrklmp vcvetkaivs tiqrkykgik iqegvvdyga rfyfytsktt vaslintlnd 1441 lnetlvtmpl gyvthglnle eaarymrslk vpatvsvssp davtayngyl tsssktpeeh 1501 fietislags ykdwsysgqs tqlgieflkr gdksvyytsn pttfhldgev itfdnlktll 1561 slrevrtikv fttvdninlh tqvvdmsmty gqqfgptyld gadvtkikph nshegktfyv 1621 lpnddtlrve afeyyhttdp sflgrymsal nhtkkwkypq vngltsikwa dnncylatal 1681 ltlqqielkf nppalqdayy rarageaanf calilaycnk tvgelgdvre tmsylfqhan 1741 ldsckrvlnv vcktcgqqqt tlkgveavmy mgtlsyeqfk kgvqipctcg kqatkylvqq 1801 espfvmmsap paqyelkhgt ftcaseytgn yqcghykhit sketlycidg alltksseyk 1861 gpitdvfyke nsytttikpv tykldgvvct eidpkldnyy kkdnsyfteq pidlvpnqpy 1921 pnasfdnfkf vcdnikfadd lnqltgykkp asrelkvtff pdlngdvvai dykhytpsfk 1981 kgakllhkpi vwhvnnatnk atykpntwci rclwstkpve tsnsfdvlks edaqgmdnla 2041 cedlkpvsee vvenptiqkd vlecnvktte vvgdiilkpa nnikiteevg htdlmaayvd 2101 nssltikkpn elsrvlglkt lathglaavn svpwdtiany akpflnkvvs tttnivtrcl 2161 nrvctnympy fftlllqlct ftrstnsrik asmpttiakn tvksvgkfcl easfnylksp 2221 nfskliniii wflllsvclg sliystaalg vlmsnlgmps yctgyregyl nstnvtiaty 2281 ctgsipcsvc lsgldsldty psletiqiti ssfkwdltaf glvaewflay ilftrffyvl 2341 glaaimqlff syfavhfisn swlmwliinl vqmapisamv rmyiffasfy yvwksyvhvv 2401 dgcnsstcmm cykrnratrv ecttivngvr rsfyvyangg kgfcklhnwn cvncdtfcag 2461 stfisdevar dlslqfkrpi nptdqssyiv dsvtvkngsi hlyfdkagqk tyerhslshf 2521 vnldnlrann tkgslpinvi vfdgkskcee ssaksasvyy sqlmcqpill ldqalvsdvg 2581 dsaevavkmf dayvntfsst fnvpmeklkt lvataeaela knvsldnvls tfisaarqgf 2641 vdsdvetkdv veclklshqs dievtgdscn nymltynkve nmtprdlgac idcsarhina 2701 qvakshnitl iwnvkdfmsl seqlrkqirs aakknnlpfk ltcattrqvv nvvttkialk 2761 ggkivnnwlk qlikvtlvfl fvaaifylit pvhvmskhtd fsseiigyka idggvtrdia 2821 stdtcfankh adfdtwfsqr ggsytndkac pliaavitre vgfvvpglpg tilrttngdf 2881 lhflprvfsa vgnicytpsk lieytdfats acvlaaecti fkdasgkpvp ycydtnvleg 2941 svayeslrpd tryvlmdgsi iqfpntyleg svrvvttfds eycrhgtcer seagvcvsts 3001 grwvlnndyy rslpgvfcgv davnlltnmf tpliqpigal disasivagg ivaivvtcla 3061 yyfmrfrraf geyshvvafn tllflmsftv lcltpvysfl pgvysviyly ltfyltndvs 3121 flahiqwmvm ftplvpfwit iayiicistk hfywffsnyl krrvvfngvs fstfeeaalc 3181 tfllnkemyl klrsdvllpl tqynrylaly nkykyfsgam dttsyreaac chlakalndf 3241 snsgsdvlyq ppqisitsav lqsgfrkmaf psgkvegcmv qvtcgtttln glwlddvvyc 3301 prhvictsed mlnpnyedll irksnhnflv qagnvqlrvi ghsmqncvlk lkvdtanpkt 3361 pkykfvriqp gqtfsvlacy ngspsgvyqc amrhnftikg sflngscgsv gfnidydcvs 3421 fcymhhmelp tgvhagtdle gnfygpfvdr qtaqaagtdt titvnvlawl yaavingdrw 3481 flnrftttln dfnlvamkyn yepltqdhvd ilgplsaqtg iavldmcasl kellqngmng 3541 rtilgsalle deftpfdvvr qcsgvtfqsa vkrtikgthh wllltiltsl lvlvqstqws 3601 lffflyenaf lpfamgiiam safammfvkh khaflclfll pslatvayfn mvympaswvm 3661 rimtwldmvd tslsgfklkd cvmyasavvl lilmtartvy ddgarrvwtl mnvltlvykv 3721 yygnaldqai smwaliisvt snysgvvttv mflargvvfm cveycpiffi tgntlqciml 3781 vycflgyfct cyfglfclln ryfrltlgvy dylvstqefr ymnsqgllpp knsidafkln 3841 ikllgvggkp cikvatvqsk msdvkctsvv llsvlqqlrv esssklwaqc vqlhndilla 3901 kdtteafekm vsllsvllsm qgavdinklc eemldnratl qaiasefssl psyaafataq 3961 eayeqavang dsevvlkklk kslnvaksef drdaamqrkl ekmadqamtq mykqarsedk 4021 rakvtsamqt mlftmlrkld ndalnniinn ardgcvplni iplttaaklm vvipdyntyk 4081 ntcdgttfty asalweiqqv vdadskivql seismdnspn lawplivtal ransavklqn 4141 nelspvalrq mscaagttqt actddnalay ynttkggrfv lallsdlqdl kwarfpksdg 4201 tgtiytelep pcrfvtdtpk gpkvkylyfi kglnnlnrgm vlgslaatvr lqagnatevp 4261 anstvlsfca favdaakayk dylasggqpi tncvkmlcth tgtgqaitvt peanmdqesf 4321 ggascclycr chidhpnpkg fcdlkgkyvq ipttcandpv gftlkntvct vcgmwkgygc 4381 scdqlrepml qsadaqsfln gfav //