- Scientific Name
- Silurus asotus
- Common Names
- Japanese common catfish, namazu; Amur catfish; Parasilurus asotus
- Bioproject
- PRJCA003888
- Biosample
- SAMC290761
- Accession No.
- GWHAZIE00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR229535
- GVM variations of the species
- -
- Submitter Organization
- School of Life Sciences, Southwest University
- Contact
- Shuqing Zheng, zhengsq0825@163.com
- Sequence author(s)
- Deshou Wang
- Released Date
- 2021-12-01
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Nextdenovo v2.0-beta.1
- Sequencing & coverage
- Oxford Nanopore PromethION 100.0
- Download
-
DNA
- Publication(s)
- Shuqing Zheng, et al. Characterization of the male-specific region containing the candidate sex-determining gene in Amur catfish (Silurus asotus) using third-generation- and pool-sequencing data. International Journal of Biological Macromolecules. 2023.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHAZIE00000000 | - | Silurus asotus-SWU2020XX | Draft genome in chromosome level | 2021-12-01 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 757,158,415 |
| GC content | 38.78% |
| Genome sequence No. | 42 |
| Maximum genome sequence length (bp) | 39,294,969 |
| Minimum genome sequence length (bp) | 54,100 |
| Average genome sequence length (bp) | 18,027,581 |
| Genome sequence N50 (bp) | 28,877,514 |
| Genome sequence N90 (bp) | 19,597,971 |