Genome Warehouse

Scientific Name: Phytophthora melonis
Common Names: -
Bioproject: PRJCA007515
Biosample: SAMC533481
Accession No.: GWHBGBS00000000
GWH reannotation accession: -
GSA raw reads: CRR352356
GVM variations of the species: -
Submitter Organization: -, Institute of Plant Protection and Microbiology, Zhejiang Academy of Agricultural Sciences
Contact: jiandong bao, baojd@fafu.edu.cn
Sequence author(s): jiandong bao
Released Date: 2021-12-10
Assembly Level: Draft genome in contig level
Genome Representation: Full Genome
Assembly method: NextDenovo V2.5.0
Sequencing & coverage: Oxford Nanopore Technologies 65.0
Illumina HiSeq 3000 38.0
Download: DNA GFF RNA Protein
Publication(s): Shengdan Lu, et al. Improved Whole Genome Sequence Resource of Phytophthora melonis CJ26, Using Long-Read Nanopore Sequencing. Molecular Plant Microbe Interactions. 2022, 35(10): 959-962.

Assembly Accession	GWH Reannotation Accession	Assembly Name	Assembly Level	Released Date	Download Files
GWHBGBS00000000	-	Phytophthora melonis CJ26	Draft genome in contig level	2021-12-10	DNA GFF RNA Protein

Genome size (bp)	105,001,437
GC content	54.92%
Contig sequence No.	94
Maximum contig sequence length (bp)	5,998,312
Minimum contig sequence length (bp)	23,101
Average contig sequence length (bp)	1,117,037
Contig N50 (bp)	2,135,025
Contig N90 (bp)	637,781

Annotation of Whole Genome Assembly

	Protein	Total
Total	38,615	38,615