- Scientific Name
- Zavarzinia sp.
- Common Names
- -
- Bioproject
- PRJCA006792
- Biosample
- SAMC465112
- Accession No.
- GWHBHAI00000000
- GWH reannotation accession
- GWHRA_BHAI00000000.1
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources
- Contact
- Chunming Dong, donnytio@163.com
- Sequence author(s)
- Ziyan Hu
- Released Date
- 2022-04-26
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- SPAdes v3.14.0
- Sequencing & coverage
- Illumina HiSeq 4000 386.0
- Download
-
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein - Publication(s) -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBHAI00000000 | GWHRA_BHAI00000000.1 | Adcm-6A_draft | Draft genome in scaffold level | 2022-04-26 |
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein |
Statistics of Genome Assembly
| Genome size (bp) | 3,954,847 |
| GC content | 67.69% |
| Scaffold sequence No. | 17 |
| Maximum scaffold sequence length (bp) | 1,217,711 |
| Minimum scaffold sequence length (bp) | 1,110 |
| Average scaffold sequence length (bp) | 232,638 |
| Scaffold N50 (bp) | 490,215 |
| Scaffold N90 (bp) | 165,038 |
Statistics of Genome Assembly
| Genome size (bp) | 3,954,847 |
| GC content | 67.69% |
| Scaffold sequence No. | 17 |
| Maximum scaffold sequence length (bp) | 1,217,711 |
| Minimum scaffold sequence length (bp) | 1,110 |
| Average scaffold sequence length (bp) | 232,638 |
| Scaffold N50 (bp) | 490,215 |
| Scaffold N90 (bp) | 165,038 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | ncRNA | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 3,742 | 48 | 3 | 1 | 12 | 33 | 3,839 |