- Scientific Name
- Lycopodium clavatum
- Common Names
- stag's-horn clubmoss;
- Bioproject
- PRJCA011232
- Biosample
- SAMC850572
- Accession No.
- GWHBJYW00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences
- Contact
- Qiaoping Xiang, qpxiang@ibcas.ac.cn
- Sequence author(s)
- Jigao Yu, Junyong Tang, Ran Wei, Meifang Lan, Xiyin Wang, Qiaoping Xiang, Xianchun Zhang
- Released Date
- 2022-08-19
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Full Genome
- Assembly method
- CLC NGS Cell v1
- Sequencing & coverage
- Illumina HiSeq 2000 76.0
PacBio 102.0 - Download
-
DNA
- Publication(s)
- Jigao Yu, et al. The first homosporous lycophyte genome revealed the association between the dynamic accumulation of LTR-RTs and genome size variation. bioRxiv. 2022.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBJYW00000000 | - | Lycopodium_clavatum | Draft genome in contig level | 2022-08-19 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 2,304,742,692 |
| GC content | 38.42% |
| Contig sequence No. | 7,102 |
| Maximum contig sequence length (bp) | 5,705,076 |
| Minimum contig sequence length (bp) | 3,171 |
| Average contig sequence length (bp) | 324,520 |
| Contig N50 (bp) | 1,012,737 |
| Contig N90 (bp) | 169,946 |