Genome Warehouse

Scientific Name: Eriobotrya japonica
Common Names: loquat;
Bioproject: PRJCA008992
Biosample: SAMC785252
Accession No.: GWHBOTF00000000
GWH reannotation accession: -
GSA raw reads: CRR506306
GVM variations of the species: -
Submitter Organization: College of Horticulture and Landscape Architecture; Southwest University, Southeast University
Contact: Danlong Jing, jingdanlong@swu.edu.cn
Sequence author(s): Danlong Jing, Xinya Liu, Qiao He, Jiangbo Dang, Ruoqian Hu, Yan Xia, Di Wu, Shuming Wang, Yin Zhang, Qingqing Xia, Chi Zhang, Yuanhui Yu, Qigao Guo, Guolu Liang
Released Date: 2022-09-30
Assembly Level: Draft genome in chromosome level
Genome Representation: Partial Genome ( Nuclear )
Assembly method: SMARTdenovo 1.0 2013
Sequencing & coverage: Nanopore 200.0
Download: DNA GFF RNA Protein
Publication(s): Danlong Jing, et al. Genome assembly of wild loquat (Eriobotrya japonica) and re-sequencing provide new insights into the genomic evolution and fruit domestication in loquat. Horticulture Research. 2022.

Assembly Accession	GWH Reannotation Accession	Assembly Name	Assembly Level	Released Date	Download Files
GWHBOTF00000000	-	wild loquat GZ-23	Draft genome in chromosome level	2022-09-30	DNA GFF RNA Protein

Genome size (bp)	784,626,777
GC content	37.76%
Genome sequence No.	230
Maximum genome sequence length (bp)	52,794,044
Minimum genome sequence length (bp)	62,239
Average genome sequence length (bp)	3,411,421
Genome sequence N50 (bp)	41,775,892
Genome sequence N90 (bp)	34,452,735

Annotation of Whole Genome Assembly

	Protein	Total
Total	45,791	45,791