- Scientific Name
- Glaciecola sp.
- Common Names
- -
- Bioproject
- PRJCA012574
- Biosample
- SAMC928045
- Accession No.
- GWHBOVP00000000
- GWH reannotation accession
- GWHRA_BOVP00000000.1
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- State Key Laboratory of Microbial Technology, Shandong University
- Contact
- Qilong Qin, qinqilong@sdu.edu.cn
- Sequence author(s)
- Qianqian Cha
- Released Date
- 2022-10-21
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Full Genome
- Assembly method
- maxbin2 MetaWRAP
concoct MetaWRAP
metabat2 MetaWRAP - Sequencing & coverage
- Illumina NovaSeq 6000 84.1
- Download
-
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein - Publication(s) -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHBOVP00000000 | GWHRA_BOVP00000000.1 | 36_18 | Draft genome in contig level | 2022-10-21 |
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein |
Statistics of Genome Assembly
| Genome size (bp) | 2,187,795 |
| GC content | 41.02% |
| Contig sequence No. | 218 |
| Maximum contig sequence length (bp) | 72,835 |
| Minimum contig sequence length (bp) | 1,646 |
| Average contig sequence length (bp) | 10,036 |
| Contig N50 (bp) | 16,663 |
| Contig N90 (bp) | 4,653 |
Statistics of Genome Assembly
| Genome size (bp) | 2,187,795 |
| GC content | 41.02% |
| Contig sequence No. | 218 |
| Maximum contig sequence length (bp) | 72,835 |
| Minimum contig sequence length (bp) | 1,646 |
| Average contig sequence length (bp) | 10,036 |
| Contig N50 (bp) | 16,663 |
| Contig N90 (bp) | 4,653 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | ncRNA | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 2,050 | 29 | 1 | 1 | 13 | 224 | 2,318 |