- Scientific Name
- uncultured marine group I thaumarchaeote
- Common Names
- uncultured marine group I archaeon, uncultured marine group I crenarchaeote
- Bioproject
- PRJCA001271
- Biosample
- SAMC058298
- Accession No.
- GWHABGY00000000
- GWH reannotation accession
- GWHRA_ABGY00000000.1
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- marine microorganisms, University of Chinese Academy of Sciences
- Contact
- Guojie Cui, 394193812@qq.com
- Sequence author(s)
- Guojie Cui
- Released Date
- 2019-12-03
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- SPAdes v3.6.2
- Sequencing & coverage
- Illumina MiSeq 31.7
- Download
-
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein - Publication(s) -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHABGY00000000 | GWHRA_ABGY00000000.1 | T3L83 | Draft genome in scaffold level | 2019-12-03 |
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein |
Statistics of Genome Assembly
| Genome size (bp) | 1,502,158 |
| GC content | 33.18% |
| Scaffold sequence No. | 96 |
| Maximum scaffold sequence length (bp) | 73,786 |
| Minimum scaffold sequence length (bp) | 2,667 |
| Average scaffold sequence length (bp) | 15,647 |
| Scaffold N50 (bp) | 21,884 |
| Scaffold N90 (bp) | 7,109 |
Statistics of Genome Assembly
| Genome size (bp) | 1,502,158 |
| GC content | 33.18% |
| Scaffold sequence No. | 96 |
| Maximum scaffold sequence length (bp) | 73,786 |
| Minimum scaffold sequence length (bp) | 2,667 |
| Average scaffold sequence length (bp) | 15,647 |
| Scaffold N50 (bp) | 21,884 |
| Scaffold N90 (bp) | 7,109 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|
| Total | 1,813 | 43 | 3 | 4 | 98 | 1,961 |