- Scientific Name
- uncultured marine group I thaumarchaeote
- Common Names
- uncultured marine group I archaeon, uncultured marine group I crenarchaeote
- Bioproject
- PRJCA001271
- Biosample
- SAMC058297
- Accession No.
- GWHABHA00000000
- GWH reannotation accession
- GWHRA_ABHA00000000.1
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- marine microorganisms, University of Chinese Academy of Sciences
- Contact
- Guojie Cui, 394193812@qq.com
- Sequence author(s)
- Guojie Cui
- Released Date
- 2019-12-03
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- SPAdes v3.6.2
- Sequencing & coverage
- Illumina MiSeq 67.7
- Download
-
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein - Publication(s) -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHABHA00000000 | GWHRA_ABHA00000000.1 | T3L113 | Draft genome in scaffold level | 2019-12-03 |
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation Protein |
Statistics of Genome Assembly
| Genome size (bp) | 1,193,387 |
| GC content | 33.32% |
| Scaffold sequence No. | 96 |
| Maximum scaffold sequence length (bp) | 44,947 |
| Minimum scaffold sequence length (bp) | 2,521 |
| Average scaffold sequence length (bp) | 12,431 |
| Scaffold N50 (bp) | 17,622 |
| Scaffold N90 (bp) | 5,295 |
Statistics of Genome Assembly
| Genome size (bp) | 1,193,387 |
| GC content | 33.32% |
| Scaffold sequence No. | 96 |
| Maximum scaffold sequence length (bp) | 44,947 |
| Minimum scaffold sequence length (bp) | 2,521 |
| Average scaffold sequence length (bp) | 12,431 |
| Scaffold N50 (bp) | 17,622 |
| Scaffold N90 (bp) | 5,295 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|
| Total | 1,443 | 40 | 3 | 3 | 98 | 1,587 |