- Scientific Name
- Flavobacterium sp.
- Common Names
- -
- Bioproject
- PRJNA668816
- Biosample
- SAMN19289847
- Accession No.
- GCA_024642105.1
- RefSeq Accession No.
- GCF_024642105.1
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Handley Lab, University of Auckland
- Released Date
- 2023-11-09
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_024642105.1 | GCF_024642105.1 | - | ASM2464210v1 | Draft genome in scaffold level | 2022-08-12 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 3,033,510 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 58 |
| GC content | 35 |
| Scaffold sequence No. | 58 |
| Scaffold L50 | 4 |
| Scaffold N50 (bp) | 241,758 |
| Scaffold N75 (bp) | 90,830 |
| Scaffold N90 (bp) | 25,477 |
| Contig sequence No. | 61 |
| Contig L50 | 4 |
| Contig N50 (bp) | 241,758 |
| Unique components No. | 58 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 3 |
| Ns gap sequence region length (bp) | 300 |
| Gaps No. between scaffolds | 0 |
Statistics of Genome Assembly
| Genome size (bp) | 3,033,510 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 58 |
| GC content | 35 |
| Scaffold sequence No. | 58 |
| Scaffold L50 | 4 |
| Scaffold N50 (bp) | 241,758 |
| Scaffold N75 (bp) | 90,830 |
| Scaffold N90 (bp) | 25,477 |
| Contig sequence No. | 61 |
| Contig L50 | 4 |
| Contig N50 (bp) | 241,758 |
| Unique components No. | 58 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 3 |
| Ns gap sequence region length (bp) | 300 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 2700 | 60 | 1 | asse0 | 27 | 3 | 2791 |