- Scientific Name
- Thaumarchaeota archaeon
- Common Names
- -
- Bioproject
- PRJNA675967
- Biosample
- SAMN16744932
- Accession No.
- GCA_028867815.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Sun Yat-sen University
- Released Date
- 2023-12-20
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA Protein
- RefSeq Download
- -
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 1,359,554 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 213 |
| GC content | 38 |
| Scaffold sequence No. | 213 |
| Scaffold L50 | 16 |
| Scaffold N50 (bp) | 28,564 |
| Scaffold N75 (bp) | 11,493 |
| Scaffold N90 (bp) | 3,111 |
| Contig sequence No. | 241 |
| Contig L50 | 19 |
| Contig N50 (bp) | 24,849 |
| Unique components No. | 213 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 28 |
| Ns gap sequence region length (bp) | 806 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 1643 | 29 | 1 | 0 | 16 | 1 | 1690 |