- Scientific Name
- Rhodococcus sp.
- Common Names
- -
- Bioproject
- PRJNA852163
- Biosample
- SAMN30025987
- Accession No.
- GCA_026393185.1
- RefSeq Accession No.
- GCF_026393185.1
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Jill Banfield's Lab at Berkeley
- Released Date
- 2023-11-22
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_026393185.1 | GCF_026393185.1 | - | ASM2639318v1 | Draft genome in scaffold level | 2022-11-24 | DNA GFF RNA Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 4,807,012 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 582 |
| GC content | 65 |
| Scaffold sequence No. | 582 |
| Scaffold L50 | 111 |
| Scaffold N50 (bp) | 12,414 |
| Scaffold N75 (bp) | 6,313 |
| Scaffold N90 (bp) | 3,693 |
| Contig sequence No. | 583 |
| Contig L50 | 111 |
| Contig N50 (bp) | 12,414 |
| Unique components No. | 582 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 1 |
| Ns gap sequence region length (bp) | 14 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4791 | 42 | 3 | 0 | 100 | 3 | 4939 |
Statistics of Genome Assembly
| Genome size (bp) | 4,807,012 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 582 |
| GC content | 65 |
| Scaffold sequence No. | 582 |
| Scaffold L50 | 111 |
| Scaffold N50 (bp) | 12,414 |
| Scaffold N75 (bp) | 6,313 |
| Scaffold N90 (bp) | 3,693 |
| Contig sequence No. | 583 |
| Contig L50 | 111 |
| Contig N50 (bp) | 12,414 |
| Unique components No. | 582 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 1 |
| Ns gap sequence region length (bp) | 14 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4592 | 42 | 3 | asse0 | 296 | 3 | 4936 |