- Scientific Name
- Thiotrichaceae bacterium
- Common Names
- -
- Bioproject
- PRJNA900590
- Biosample
- SAMN32733660
- Accession No.
- GCA_028688145.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- University of Waterloo
- Released Date
- 2023-11-23
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA Protein
- RefSeq Download
- -
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 3,627,289 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 31 |
| GC content | 44.5 |
| Scaffold sequence No. | 31 |
| Scaffold L50 | 4 |
| Scaffold N50 (bp) | 183,568 |
| Scaffold N75 (bp) | 115,386 |
| Scaffold N90 (bp) | 74,862 |
| Contig sequence No. | 33 |
| Contig L50 | 4 |
| Contig N50 (bp) | 175,072 |
| Unique components No. | 31 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 2 |
| Ns gap sequence region length (bp) | 200 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 3051 | 42 | 1 | 0 | 55 | 3 | 3152 |