- Scientific Name
- Rhodococcus sp.
- Common Names
- -
- Bioproject
- PRJNA967334
- Biosample
- SAMN34588004
- Accession No.
- GCA_030016735.1
- RefSeq Accession No.
- GCF_030016735.1
- RefSeq vs GenBank similarity
- identical
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Research Center of Biotechnology RAS
- Released Date
- 2023-10-17
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_030016735.1 | GCF_030016735.1 | identical | ASM3001673v1 | Draft genome in scaffold level | 2023-05-15 | DNA GFF RNA Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 4,913,430 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 291 |
| GC content | 65 |
| Scaffold sequence No. | 291 |
| Scaffold L50 | 58 |
| Scaffold N50 (bp) | 25,313 |
| Scaffold N75 (bp) | 15,285 |
| Scaffold N90 (bp) | 8,792 |
| Contig sequence No. | 310 |
| Contig L50 | 62 |
| Contig N50 (bp) | 24,274 |
| Unique components No. | 291 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 19 |
| Ns gap sequence region length (bp) | 190 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4716 | 40 | 2 | 0 | 43 | 1 | 4802 |
Statistics of Genome Assembly
| Genome size (bp) | 4,913,430 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 291 |
| GC content | 65 |
| Scaffold sequence No. | 291 |
| Scaffold L50 | 58 |
| Scaffold N50 (bp) | 25,313 |
| Scaffold N75 (bp) | 15,285 |
| Scaffold N90 (bp) | 8,792 |
| Contig sequence No. | 310 |
| Contig L50 | 62 |
| Contig N50 (bp) | 24,274 |
| Unique components No. | 291 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 19 |
| Ns gap sequence region length (bp) | 190 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4630 | 40 | 2 | asse0 | 131 | 1 | 4804 |