- Scientific Name
- Populus nigra
- Common Names
- black poplar, Lombardy poplar; Populus pyramidalis
- Bioproject
- PRJEB62629
- Biosample
- SAMEA110450206
- Accession No.
- GCA_951802175.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- WELLCOME SANGER INSTITUTE
- Released Date
- 2024-01-30
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_951802175.1 | - | - | ddPopNigr1.1 | Draft genome in chromosome level | 2023-05-27 | DNA |
| GCA_951802175.1 | GCF_951802175.1 | different | ddPopNigr1.1 | Draft genome in chromosome level | 2023-05-27 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 414,184,750 |
| Chromosomes, organellas and plasmids sequnece No. | 23 |
| Genome sequence No. | 25 |
| GC content | 35 |
| Scaffold sequence No. | 25 |
| Scaffold L50 | 7 |
| Scaffold N50 (bp) | 22,490,379 |
| Scaffold N75 (bp) | 15,933,088 |
| Scaffold N90 (bp) | 14,411,003 |
| Contig sequence No. | 302 |
| Contig L50 | 40 |
| Contig N50 (bp) | 3,535,101 |
| Unique components No. | 25 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 277 |
| Ns gap sequence region length (bp) | 55,400 |
| Gaps No. between scaffolds | 0 |