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  • Stenotrophomonas sp.
  • ASM3197667v1
    • Scientific Name
    Stenotrophomonas sp.
    Common Names
    -
    Bioproject
    PRJNA850115
    Biosample
    SAMN29156458
    Accession No.
    GCA_031976675.1
    RefSeq Accession No.
    GCF_031976675.1
    RefSeq vs GenBank similarity
    identical
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    NFDI4Microbiota
    Released Date
    2023-11-15
    Assembly Level
    Draft genome in scaffold level
    Genome Representation
    Full Genome
    Download
    DNA
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level Release Date Download Files
    GCA_031976675.1 GCF_031976675.1 identical ASM3197667v1 Draft genome in scaffold level 2023-09-26 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 4,371,781
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 527
    GC content 66.5
    Scaffold sequence No. 527
    Scaffold L50 100
    Scaffold N50 (bp) 12,192
    Scaffold N75 (bp) 6,683
    Scaffold N90 (bp) 3,717
    Contig sequence No. 548
    Contig L50 105
    Contig N50 (bp) 11,694
    Unique components No. 527
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 21
    Ns gap sequence region length (bp) 761
    Gaps No. between scaffolds 0

    Statistics of Genome Assembly

    Genome size (bp) 4,371,781
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 527
    GC content 66.5
    Scaffold sequence No. 527
    Scaffold L50 100
    Scaffold N50 (bp) 12,192
    Scaffold N75 (bp) 6,683
    Scaffold N90 (bp) 3,717
    Contig sequence No. 548
    Contig L50 105
    Contig N50 (bp) 11,694
    Unique components No. 527
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 21
    Ns gap sequence region length (bp) 761
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 4041 58 11 275 3 4379