- Scientific Name
- Gadus macrocephalus
- Common Names
- Pacific cod;
- Bioproject
- PRJNA943285
- Biosample
- SAMN33716189
- Accession No.
- GCA_031193875.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- NOAA Fisheries
- Released Date
- 2023-11-27
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_031193875.1 | - | - | ASM3119387v1 | Draft genome in chromosome level | 2023-09-05 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 542,793,348 |
| Chromosomes, organellas and plasmids sequnece No. | 23 |
| Genome sequence No. | 23 |
| GC content | 45.5 |
| Scaffold sequence No. | 23 |
| Scaffold L50 | 10 |
| Scaffold N50 (bp) | 23,747,611 |
| Scaffold N75 (bp) | 21,976,461 |
| Scaffold N90 (bp) | 18,716,144 |
| Contig sequence No. | 5,027 |
| Contig L50 | 610 |
| Contig N50 (bp) | 196,309 |
| Unique components No. | 23 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 5,004 |
| Ns gap sequence region length (bp) | 526,473 |
| Gaps No. between scaffolds | 0 |