Genome Warehouse

Scientific Name: Sphingobium sp.
Common Names: -
Bioproject: PRJNA391943
Biosample: SAMN07620108
Accession No.: GCA_002729925.1
RefSeq Accession No.: GCF_002729925.1
RefSeq vs GenBank similarity: -
Source: NCBI
External Links: NCBI
Submitter Organization: Tara Oceans Consortium
Released Date: 2023-11-03
Assembly Level: Draft genome in contig level
Genome Representation: Full Genome
Download: DNA GFF RNA Protein
RefSeq Download: RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein
Publication(s)

History

Assembly Accession	RefSeq Accession	RefSeq vs GenBank similarity	Assembly Name	Assembly Level	Release Date	Download Files
GCA_002729925.1	GCF_002729925.1	-	ASM272992v1	Draft genome in contig level	2017-10-26	DNA GFF RNA Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein

GenBank
RefSeq

Statistics of Genome Assembly

Genome size (bp)	5,511,802
Chromosomes, organellas and plasmids sequnece No.	0
Genome sequence No.	91
GC content	63
Contig sequence No.	91
Contig L50	10
Contig N50 (bp)	144,101
Unique components No.	91
No. of regions with alternate loci or patches	0
Ns gap sequence No. (bp)	0
Ns gap sequence region length (bp)	0
Gaps No. between scaffolds	0

Annotation of Whole Genome Assembly

	Protein	trna	rrna	ncrna	Pseudogene	Others	Total
Total	5136	51	3	0	162	4	5356

Statistics of Genome Assembly

Genome size (bp)	5,511,802
Chromosomes, organellas and plasmids sequnece No.	0
Genome sequence No.	91
GC content	63
Contig sequence No.	91
Contig L50	10
Contig N50 (bp)	144,101
Unique components No.	91
No. of regions with alternate loci or patches	0
Ns gap sequence No. (bp)	0
Ns gap sequence region length (bp)	0
Gaps No. between scaffolds	0

Annotation of Whole Genome Assembly

asse

	Protein	trna	rrna	ncrna	Pseudogene	Others	Total
Total	5227	52	3	0	118	4	5404