- Scientific Name
- Halomonas sp.
- Common Names
- -
- Bioproject
- PRJNA417962
- Biosample
- SAMN08020469
- Accession No.
- GCA_003531285.1
- RefSeq Accession No.
- GCF_003531285.1
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- University of Queensland
- Released Date
- 2023-11-03
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_003531285.1 | GCF_003531285.1 | - | ASM353128v1 | Draft genome in scaffold level | 2018-09-10 | DNA GFF RNA Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 3,651,433 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 45 |
| GC content | 54 |
| Scaffold sequence No. | 45 |
| Scaffold L50 | 8 |
| Scaffold N50 (bp) | 123,536 |
| Scaffold N75 (bp) | 85,092 |
| Scaffold N90 (bp) | 39,003 |
| Contig sequence No. | 51 |
| Contig L50 | 9 |
| Contig N50 (bp) | 123,536 |
| Unique components No. | 45 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 6 |
| Ns gap sequence region length (bp) | 459 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 3273 | 43 | 2 | 1 | 72 | 3 | 3394 |
Statistics of Genome Assembly
| Genome size (bp) | 3,651,433 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 45 |
| GC content | 54 |
| Scaffold sequence No. | 45 |
| Scaffold L50 | 8 |
| Scaffold N50 (bp) | 123,536 |
| Scaffold N75 (bp) | 85,092 |
| Scaffold N90 (bp) | 39,003 |
| Contig sequence No. | 51 |
| Contig L50 | 9 |
| Contig N50 (bp) | 123,536 |
| Unique components No. | 45 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 6 |
| Ns gap sequence region length (bp) | 459 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 3298 | 44 | 2 | asse1 | 37 | 3 | 3385 |