- Scientific Name
- Fusarium oxysporum
- Common Names
- -
- Bioproject
- PRJNA855134
- Biosample
- SAMN30354182
- Accession No.
- GCA_027945535.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- University of California, Riverside
- Released Date
- 2023-11-18
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA Protein
- RefSeq Download
- -
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 45,048,357 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 208 |
| GC content | 47.5 |
| Scaffold sequence No. | 208 |
| Scaffold L50 | 13 |
| Scaffold N50 (bp) | 1,348,082 |
| Scaffold N75 (bp) | 715,293 |
| Scaffold N90 (bp) | 289,721 |
| Contig sequence No. | 324 |
| Contig L50 | 30 |
| Contig N50 (bp) | 469,897 |
| Unique components No. | 208 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 116 |
| Ns gap sequence region length (bp) | 2,991 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 15208 | 266 | 0 | 0 | 0 | 0 | 15474 |