- Scientific Name
- Apis laboriosa
- Common Names
- giant Himalayan honeybee; Himalayan honeybee;
- Bioproject
- PRJNA647849
- Biosample
- SAMN15599769
- Accession No.
- GCA_014066325.1
- RefSeq Accession No.
- GCF_014066325.1
- RefSeq vs GenBank similarity
- different
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Chongqing Normal University
- Released Date
- 2023-10-18
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_014066325.1 | GCF_014066325.1 | different | ASM1406632v1 | Draft genome in scaffold level | 2020-08-05 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 226,063,288 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 4,376 |
| GC content | 32 |
| Scaffold sequence No. | 4,376 |
| Scaffold L50 | 21 |
| Scaffold N50 (bp) | 3,339,770 |
| Scaffold N75 (bp) | 1,604,277 |
| Scaffold N90 (bp) | 719,673 |
| Contig sequence No. | 5,929 |
| Contig L50 | 218 |
| Contig N50 (bp) | 303,790 |
| Unique components No. | 4,376 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 1,553 |
| Ns gap sequence region length (bp) | 429,170 |
| Gaps No. between scaffolds | 0 |
Statistics of Genome Assembly
| Genome size (bp) | 226,078,798 |
| Chromosomes, organellas and plasmids sequnece No. | 1 |
| Genome sequence No. | 4,377 |
| Scaffold sequence No. | 4,377 |
| Scaffold L50 | 21 |
| Scaffold N50 (bp) | 3,339,770 |
| Scaffold N75 (bp) | 1,604,277 |
| Scaffold N90 (bp) | 719,673 |
| Contig sequence No. | 5,930 |
| Contig L50 | 218 |
| Contig N50 (bp) | 303,790 |
| Unique components No. | 4,377 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 1,553 |
| Ns gap sequence region length (bp) | 429,170 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 9783 | 217 | 15 | asse801 | 102 | 1 | 10919 |