- Scientific Name
- Scophthalmus maximus
- Common Names
- turbot; Pleuronectes maximus, Psetta maxima, Rhombus maximus
- Bioproject
- PRJNA631898
- Biosample
- SAMN14896287
- Accession No.
- GCA_013347765.1
- RefSeq Accession No.
- GCF_013347765.1
- RefSeq vs GenBank similarity
- different
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- CIGENE
- Released Date
- 2023-12-14
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_013347765.1 | GCF_013347765.1 | different | ASM1334776v1 | Draft genome in chromosome level | 2020-06-18 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 556,679,315 |
| Chromosomes, organellas and plasmids sequnece No. | 22 |
| Genome sequence No. | 126 |
| GC content | 43.5 |
| Scaffold sequence No. | 126 |
| Scaffold L50 | 10 |
| Scaffold N50 (bp) | 25,949,660 |
| Scaffold N75 (bp) | 23,140,758 |
| Scaffold N90 (bp) | 20,466,349 |
| Contig sequence No. | 177 |
| Contig L50 | 11 |
| Contig N50 (bp) | 20,466,349 |
| Unique components No. | 126 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 51 |
| Ns gap sequence region length (bp) | 2,160 |
| Gaps No. between scaffolds | 0 |
Statistics of Genome Assembly
| Genome size (bp) | 556,696,898 |
| Chromosomes, organellas and plasmids sequnece No. | 23 |
| Genome sequence No. | 127 |
| GC content | 43.5 |
| Scaffold sequence No. | 127 |
| Scaffold L50 | 10 |
| Scaffold N50 (bp) | 25,949,660 |
| Scaffold N75 (bp) | 23,140,758 |
| Scaffold N90 (bp) | 20,466,349 |
| Contig sequence No. | 178 |
| Contig L50 | 11 |
| Contig N50 (bp) | 20,466,349 |
| Unique components No. | 127 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 51 |
| Ns gap sequence region length (bp) | 2,160 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 21693 | 1284 | 5338 | asse3528 | 6271 | 76 | 38190 |