- Scientific Name
- Silurus meridionalis
- Common Names
- Silurus soldatovi meridionalis
- Bioproject
- PRJNA623722
- Biosample
- SAMN14558653
- Accession No.
- GCA_014805685.1
- RefSeq Accession No.
- GCF_014805685.1
- RefSeq vs GenBank similarity
- different
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Southwest University
- Released Date
- 2023-12-14
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_014805685.1 | GCF_014805685.1 | different | ASM1480568v1 | Draft genome in chromosome level | 2020-10-02 | DNA GFF RNA Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 742,579,920 |
| Chromosomes, organellas and plasmids sequnece No. | 29 |
| Genome sequence No. | 285 |
| GC content | 39 |
| Scaffold sequence No. | 285 |
| Scaffold L50 | 12 |
| Scaffold N50 (bp) | 28,049,309 |
| Scaffold N75 (bp) | 21,332,171 |
| Scaffold N90 (bp) | 18,791,108 |
| Contig sequence No. | 882 |
| Contig L50 | 20 |
| Contig N50 (bp) | 13,195,069 |
| Unique components No. | 285 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 597 |
| Ns gap sequence region length (bp) | 1,345,608 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 22769 | 0 | 0 | 0 | 0 | 0 | 22769 |
Statistics of Genome Assembly
| Genome size (bp) | 742,596,447 |
| Chromosomes, organellas and plasmids sequnece No. | 30 |
| Genome sequence No. | 286 |
| GC content | 39 |
| Scaffold sequence No. | 286 |
| Scaffold L50 | 12 |
| Scaffold N50 (bp) | 28,049,309 |
| Scaffold N75 (bp) | 21,332,171 |
| Scaffold N90 (bp) | 18,791,108 |
| Contig sequence No. | 883 |
| Contig L50 | 20 |
| Contig N50 (bp) | 13,195,069 |
| Unique components No. | 286 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 597 |
| Ns gap sequence region length (bp) | 1,345,608 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 22599 | 2136 | 30 | asse3240 | 386 | 264 | 28655 |