- Scientific Name
- marine metagenome
- Common Names
- ocean metagenome
- Bioproject
- PRJNA289734
- Biosample
- SAMN03860283
- Accession No.
- GCA_001625805.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- King Abdullah University of Science and Technology
- Released Date
- 2023-11-20
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_001625805.1 | - | - | ASM162580v1 | Draft genome in scaffold level | 2016-04-22 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 58,207,778 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 45,536 |
| GC content | 40.5 |
| Scaffold sequence No. | 45,536 |
| Scaffold L50 | 8,775 |
| Scaffold N50 (bp) | 1,543 |
| Scaffold N75 (bp) | 811 |
| Scaffold N90 (bp) | 597 |
| Contig sequence No. | 45,785 |
| Contig L50 | 8,877 |
| Contig N50 (bp) | 1,530 |
| Unique components No. | 45,536 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 249 |
| Ns gap sequence region length (bp) | 7,605 |
| Gaps No. between scaffolds | 0 |