- Scientific Name
- Gossypium hirsutum
- Common Names
- American cotton, American upland cotton; cotton; Gossypium hirsutum subsp. mexicanum, Gossypium lanceolatum, Gossypium purpurascens
- Bioproject
- PRJNA259930
- Biosample
- SAMN03342414
- Accession No.
- GCA_000987745.1
- RefSeq Accession No.
- GCF_000987745.1
- RefSeq vs GenBank similarity
- different
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- BGI-shenzhen
- Released Date
- 2023-10-30
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_000987745.1 | GCF_000987745.1 | different | ASM98774v1 | Draft genome in chromosome level | 2015-05-05 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 2,188,311,125 |
| Chromosomes, organellas and plasmids sequnece No. | 26 |
| Genome sequence No. | 9,146 |
| Scaffold sequence No. | 9,146 |
| Scaffold L50 | 12 |
| Scaffold N50 (bp) | 70,911,690 |
| Scaffold N75 (bp) | 47,987,235 |
| Scaffold N90 (bp) | 558,740 |
| Contig sequence No. | 57,882 |
| Contig L50 | 8,043 |
| Contig N50 (bp) | 78,260 |
| Unique components No. | 57,882 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 48,736 |
| Ns gap sequence region length (bp) | 62,279,879 |
| Gaps No. between scaffolds | 0 |