- Scientific Name
- Gossypium hirsutum
- Common Names
- American cotton, American upland cotton; cotton; Gossypium hirsutum subsp. mexicanum, Gossypium lanceolatum, Gossypium purpurascens
- Bioproject
- PRJNA411996
- Biosample
- SAMN07692727
- Accession No.
- GCA_002504345.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Clemson University
- Released Date
- 2023-10-31
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Partial Genome ( Nuclear )
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_002504345.1 | - | - | ASM250434v1 | Draft genome in chromosome level | 2017-10-10 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 169,284,829 |
| Chromosomes, organellas and plasmids sequnece No. | 4 |
| Genome sequence No. | 4 |
| Scaffold sequence No. | 4 |
| Scaffold L50 | 2 |
| Scaffold N50 (bp) | 47,978,869 |
| Scaffold N75 (bp) | 32,486,404 |
| Scaffold N90 (bp) | 26,685,906 |
| Contig sequence No. | 9,287 |
| Contig L50 | 616 |
| Contig N50 (bp) | 55,956 |
| Unique components No. | 4 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 9,283 |
| Ns gap sequence region length (bp) | 20,407,718 |
| Gaps No. between scaffolds | 0 |