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  • Carya illinoinensis
  • C.illinoinensisOaxaca_v1
    • Scientific Name
    Carya illinoinensis
    Common Names
    pecan; Carya illinoensis
    Bioproject
    PRJNA680555
    Biosample
    SAMN16882286
    Accession No.
    GCA_016808215.1
    RefSeq Accession No.
    -
    RefSeq vs GenBank similarity
    -
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    DOE Joint Genome Institute
    Released Date
    2023-10-23
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Download
    DNA GFF RNA Protein
    RefSeq Download
    -
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level Release Date Download Files
    GCA_016808215.1 - - C.illinoinensisOaxaca_v1 Draft genome in chromosome level 2021-02-10 DNA GFF RNA Protein

    Statistics of Genome Assembly

    Genome size (bp) 649,961,136
    Chromosomes, organellas and plasmids sequnece No. 16
    Genome sequence No. 298
    GC content 36
    Scaffold sequence No. 552
    Scaffold L50 51
    Scaffold N50 (bp) 4,362,123
    Scaffold N75 (bp) 2,011,140
    Scaffold N90 (bp) 1,065,839
    Contig sequence No. 555
    Contig L50 52
    Contig N50 (bp) 4,361,874
    Unique components No. 555
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 3
    Ns gap sequence region length (bp) 2,540,135
    Gaps No. between scaffolds 254
    Annotation of Whole Genome Assembly
    Protein trna rrna ncrna Pseudogene Others Total
    Total 31911 0 0 0 0 0 31911