- Scientific Name
- Ricinus communis
- Common Names
- castor bean; Ricinus sanguineus
- Bioproject
- PRJNA589181
- Biosample
- SAMN13269094
- Accession No.
- GCA_019578655.1
- RefSeq Accession No.
- GCF_019578655.1
- RefSeq vs GenBank similarity
- different
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Wuhan Botanical Garden, University of Chinese Academy of Sciences
- Released Date
- 2023-12-15
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_019578655.1 | GCF_019578655.1 | different | ASM1957865v1 | Draft genome in chromosome level | 2021-08-12 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 316,113,298 |
| Chromosomes, organellas and plasmids sequnece No. | 11 |
| Genome sequence No. | 146 |
| Scaffold sequence No. | 146 |
| Scaffold L50 | 5 |
| Scaffold N50 (bp) | 31,927,722 |
| Scaffold N75 (bp) | 28,815,829 |
| Scaffold N90 (bp) | 28,210,331 |
| Contig sequence No. | 476 |
| Contig L50 | 14 |
| Contig N50 (bp) | 7,311,548 |
| Unique components No. | 146 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 330 |
| Ns gap sequence region length (bp) | 165,000 |
| Gaps No. between scaffolds | 0 |
Statistics of Genome Assembly
| Genome size (bp) | 315,619,833 |
| Chromosomes, organellas and plasmids sequnece No. | 10 |
| Genome sequence No. | 140 |
| GC content | 33 |
| Scaffold sequence No. | 140 |
| Scaffold L50 | 5 |
| Scaffold N50 (bp) | 31,927,722 |
| Scaffold N75 (bp) | 28,815,829 |
| Scaffold N90 (bp) | 28,210,331 |
| Contig sequence No. | 470 |
| Contig L50 | 14 |
| Contig N50 (bp) | 7,311,548 |
| Unique components No. | 140 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 330 |
| Ns gap sequence region length (bp) | 165,000 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 20511 | 546 | 59 | asse3040 | 1184 | 0 | 25340 |