- Scientific Name
- Gossypium hirsutum
- Common Names
- American cotton, American upland cotton; cotton; Gossypium hirsutum subsp. mexicanum, Gossypium lanceolatum, Gossypium purpurascens
- Bioproject
- PRJNA705219
- Biosample
- SAMN18079028
- Accession No.
- GCA_021461685.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- USDA
- Released Date
- 2023-11-21
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_021461685.1 | - | - | ASM2146168v1 | Draft genome in chromosome level | 2022-01-13 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 2,422,292,498 |
| Chromosomes, organellas and plasmids sequnece No. | 26 |
| Genome sequence No. | 2,876 |
| GC content | 35.5 |
| Scaffold sequence No. | 2,876 |
| Scaffold L50 | 11 |
| Scaffold N50 (bp) | 98,310,344 |
| Scaffold N75 (bp) | 66,728,972 |
| Scaffold N90 (bp) | 59,435,069 |
| Contig sequence No. | 2,886 |
| Contig L50 | 12 |
| Contig N50 (bp) | 68,797,300 |
| Unique components No. | 2,876 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 10 |
| Ns gap sequence region length (bp) | 380 |
| Gaps No. between scaffolds | 0 |