- Scientific Name
- Nitrospinaceae bacterium
- Common Names
- -
- Bioproject
- PRJNA598416
- Biosample
- SAMN13684281
- Accession No.
- GCA_011775555.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Maharaja Krishnakumarsinhji Bhavnagar University
- Released Date
- 2023-10-25
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA Protein
- RefSeq Download
- -
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 4,177,482 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 1,224 |
| GC content | 55.5 |
| Scaffold sequence No. | 1,224 |
| Scaffold L50 | 228 |
| Scaffold N50 (bp) | 4,834 |
| Scaffold N75 (bp) | 2,338 |
| Scaffold N90 (bp) | 1,490 |
| Contig sequence No. | 3,096 |
| Contig L50 | 354 |
| Contig N50 (bp) | 2,793 |
| Unique components No. | 1,224 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 1,872 |
| Ns gap sequence region length (bp) | 136,464 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4768 | 41 | 0 | 0 | 499 | 4 | 5312 |