- Scientific Name
- Brevundimonas sp.
- Common Names
- -
- Bioproject
- PRJNA545004
- Biosample
- SAMN12098020
- Accession No.
- GCA_012269935.1
- RefSeq Accession No.
- GCF_012269935.1
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Australian Centre for Ecogenomics
- Released Date
- 2023-11-06
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_012269935.1 | GCF_012269935.1 | - | ASM1226993v1 | Draft genome in scaffold level | 2020-04-09 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 3,067,639 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 399 |
| GC content | 67.5 |
| Scaffold sequence No. | 399 |
| Scaffold L50 | 96 |
| Scaffold N50 (bp) | 10,196 |
| Scaffold N75 (bp) | 6,081 |
| Scaffold N90 (bp) | 3,693 |
| Contig sequence No. | 554 |
| Contig L50 | 124 |
| Contig N50 (bp) | 7,800 |
| Unique components No. | 399 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 155 |
| Ns gap sequence region length (bp) | 1,640 |
| Gaps No. between scaffolds | 0 |
Statistics of Genome Assembly
| Genome size (bp) | 3,067,639 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 399 |
| GC content | 67.5 |
| Scaffold sequence No. | 399 |
| Scaffold L50 | 96 |
| Scaffold N50 (bp) | 10,196 |
| Scaffold N75 (bp) | 6,081 |
| Scaffold N90 (bp) | 3,693 |
| Contig sequence No. | 554 |
| Contig L50 | 124 |
| Contig N50 (bp) | 7,800 |
| Unique components No. | 399 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 155 |
| Ns gap sequence region length (bp) | 1,640 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 3079 | 34 | 0 | asse1 | 182 | 3 | 3299 |