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  • Rhodococcus sp.
  • ASM1646242v1
    • Scientific Name
    Rhodococcus sp.
    Common Names
    -
    Bioproject
    PRJNA663590
    Biosample
    SAMN16655431
    Accession No.
    GCA_016462425.1
    RefSeq Accession No.
    GCF_016462425.1
    RefSeq vs GenBank similarity
    -
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    University of Minnesota Duluth
    Released Date
    2023-11-07
    Assembly Level
    Draft genome in scaffold level
    Genome Representation
    Full Genome
    Download
    DNA GFF RNA Protein
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level Release Date Download Files
    GCA_016462425.1 GCF_016462425.1 - ASM1646242v1 Draft genome in scaffold level 2021-01-03 DNA GFF RNA Protein
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 5,321,055
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 206
    GC content 64.5
    Scaffold sequence No. 206
    Scaffold L50 38
    Scaffold N50 (bp) 43,952
    Scaffold N75 (bp) 23,096
    Scaffold N90 (bp) 11,932
    Contig sequence No. 288
    Contig L50 52
    Contig N50 (bp) 33,586
    Unique components No. 206
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 82
    Ns gap sequence region length (bp) 7,930
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    Protein trna rrna ncrna Pseudogene Others Total
    Total 5000 40 1 0 80 3 5124

    Statistics of Genome Assembly

    Genome size (bp) 5,321,055
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 206
    GC content 64.5
    Scaffold sequence No. 206
    Scaffold L50 38
    Scaffold N50 (bp) 43,952
    Scaffold N75 (bp) 23,096
    Scaffold N90 (bp) 11,932
    Contig sequence No. 288
    Contig L50 52
    Contig N50 (bp) 33,586
    Unique components No. 206
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 82
    Ns gap sequence region length (bp) 7,930
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 4974 40 10 126 3 5144