- Scientific Name
- Sphingobium sp.
- Common Names
- -
- Bioproject
- PRJNA663590
- Biosample
- SAMN16655389
- Accession No.
- GCA_016463275.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- University of Minnesota Duluth
- Released Date
- 2023-12-03
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA Protein
- RefSeq Download
- -
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 3,183,277 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 474 |
| GC content | 64 |
| Scaffold sequence No. | 474 |
| Scaffold L50 | 93 |
| Scaffold N50 (bp) | 9,787 |
| Scaffold N75 (bp) | 5,443 |
| Scaffold N90 (bp) | 2,925 |
| Contig sequence No. | 611 |
| Contig L50 | 113 |
| Contig N50 (bp) | 8,342 |
| Unique components No. | 474 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 137 |
| Ns gap sequence region length (bp) | 2,192 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 3181 | 33 | 2 | 0 | 111 | 3 | 3330 |