- Scientific Name
- Microbacterium sp.
- Common Names
- Aureobacterium sp.
- Bioproject
- PRJNA629336
- Biosample
- SAMN18061411
- Accession No.
- GCA_017306355.1
- RefSeq Accession No.
- GCF_017306355.1
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Jill Banfield Lab (University of California Berkeley)
- Released Date
- 2023-11-09
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | Release Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_017306355.1 | GCF_017306355.1 | - | ASM1730635v1 | Draft genome in scaffold level | 2021-03-08 | DNA GFF RNA Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 3,033,297 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 740 |
| GC content | 70.5 |
| Scaffold sequence No. | 740 |
| Scaffold L50 | 171 |
| Scaffold N50 (bp) | 5,618 |
| Scaffold N75 (bp) | 3,054 |
| Scaffold N90 (bp) | 1,991 |
| Contig sequence No. | 745 |
| Contig L50 | 172 |
| Contig N50 (bp) | 5,606 |
| Unique components No. | 740 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 5 |
| Ns gap sequence region length (bp) | 413 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 3218 | 27 | 1 | 0 | 47 | 3 | 3296 |
Statistics of Genome Assembly
| Genome size (bp) | 3,033,297 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 740 |
| GC content | 70.5 |
| Scaffold sequence No. | 740 |
| Scaffold L50 | 171 |
| Scaffold N50 (bp) | 5,618 |
| Scaffold N75 (bp) | 3,054 |
| Scaffold N90 (bp) | 1,991 |
| Contig sequence No. | 745 |
| Contig L50 | 172 |
| Contig N50 (bp) | 5,606 |
| Unique components No. | 740 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 5 |
| Ns gap sequence region length (bp) | 413 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 3036 | 27 | 1 | asse0 | 268 | 3 | 3335 |