Basic information   
Locus name AT5G42900
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryOthers
Effect for Senescenceunclear
Gene Descriptionunknown protein
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

SequenceAT5G42900.1 | Genomic | mRNA | CDS | Protein
AT5G42900.2 | Genomic | mRNA | CDS | Protein
AT5G42900.3 | Genomic | mRNA | CDS | Protein
miRNA Interaction      
Details
target: AT5G42900.1 
miRNA: ath-miR5021
miRNA: ath-miR5021
mfe: -28.9 kcal/mol 
p-value: 0.000050 

position: 37 
target 5' A               C    U  3' 
           UUUUCUUCUUCUUCU UCUC     
           AAAAGAAGAAGAAGA AGAG     
miRNA  3'                      U  5' 

target: AT5G42900.2 
miRNA: ath-miR5021
miRNA: ath-miR5021
mfe: -28.9 kcal/mol 
p-value: 0.000051 

position: 37 
target 5' A               C    U  3' 
           UUUUCUUCUUCUUCU UCUC     
           AAAAGAAGAAGAAGA AGAG     
miRNA  3'                      U  5' 

target: AT5G42900.3 
miRNA: ath-miR5021
miRNA: ath-miR5021
mfe: -28.9 kcal/mol 
p-value: 0.000051 

position: 37 
target 5' A               C    U  3' 
           UUUUCUUCUUCUUCU UCUC     
           AAAAGAAGAAGAAGA AGAG     
miRNA  3'                      U  5' 
Ortholog Group      
Ortholog Groups: OG5_164275
AccessionTaxon
NP_001031998Arabidopsis thaliana
NP_568615 ( AT5G42900 ) Arabidopsis thaliana
NP_851121Arabidopsis thaliana
NP_001049187Oryza sativa Japonica Group
NP_001064501Oryza sativa Japonica Group
30170.m013871Ricinus communis