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Choose the program to use and the database to search against:
Program:
blastp
blastn
blastx
tblastn
Database in LSD:
Protein
CDS
mRNA
Genomic
Enter sequence below in
FASTA
format (
example
):
or load it from local disk:
Set sub-sequence: From
To
The query sequence is
filtered
for low complexity regions by default.
Filter:
Low complexity
Mask for lookup table only
Expect:
Perform ungapped alignment
Graphic overview
Alignment view:
Pairwise
master-slave with identities
master-slave without identities
flat master-slave with identities
flat master-slave without identities
BLAST XML
Hit Table
Descriptions:
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Alignments:
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