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| Locus name | AT3G03870 |
| Organism | Arabidopsis thaliana | | Taxonomic identifier | [NCBI] | | Function category | Others | | Effect for Senescence | unclear | | Gene Description | unknown protein | | Evidence | Genomic evidence:microarray data [Ref 1] | | References | 1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-WollastonHigh-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.Plant Cell 2011 Mar;23(3):873-94 | | Sequence | AT3G03870.1 | Genomic | mRNA | CDS | Protein
AT3G03870.2 | Genomic | mRNA | CDS | Protein
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| | Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4) | | Comparation |
Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction  | |
| | Details | | target: AT3G03870.1
miRNA: ath-miR834
miRNA: ath-miR834
mfe: -37.0 kcal/mol
p-value: 0.000139
position: 874
target 5' G A U 3'
UUGC GCUGCUGCUGCUACCG
AAUG UGGCGAUGACGAUGGU
miRNA 3' G 5'
target: AT3G03870.2
miRNA: ath-miR834
miRNA: ath-miR834
mfe: -37.0 kcal/mol
p-value: 0.000195
position: 874
target 5' G A U 3'
UUGC GCUGCUGCUGCUACCG
AAUG UGGCGAUGACGAUGGU
miRNA 3' G 5'
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| Ortholog Group | |
| | Ortholog Groups: OG5_160310 | |
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