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| Locus name | AT5G19540 |
| Organism | Arabidopsis thaliana | | Taxonomic identifier | [NCBI] | | Function category | Others:unknown | | Effect for Senescence | Unclear | | Gene Description | unknown protein | | Evidence | Molecular evidence: SSH and Northern [Ref 1] | | References | 1: Gepstein S, Sabehi G, Carp MJ, Hajouj T, Nesher MF, Yariv I, Dor C, Bassani MLarge-scale identification of leaf senescence-associated genes.Plant J. 2003 Dec;36(5):629-42 | | Sequence | AT5G19540.1 | Genomic | mRNA | CDS | Protein
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miRNA Interaction  | |
| | Details | | target: AT5G19540.1
miRNA: ath-miR159a
miRNA: ath-miR159a
mfe: -27.5 kcal/mol
p-value: 0.015599
position: 1347
target 5' G U C 3'
GGAGCUCU CUUUGGUUCGA
UCUCGAGG GAAGUUAGGUU
miRNA 3' A U 5'
target: AT5G19540.1
miRNA: ath-miR159b
miRNA: ath-miR159b
mfe: -27.1 kcal/mol
p-value: 0.019153
position: 1346
target 5' U U C 3'
GGGAGCUCU CUUUGGUUCGA
UUCUCGAGG GAAGUUAGGUU
miRNA 3' U 5'
target: AT5G19540.1
miRNA: ath-miR159c
miRNA: ath-miR159c
mfe: -29.9 kcal/mol
p-value: 0.006413
position: 1346
target 5' U U C 3'
GGGAGCUCU CUUUGGUUCGA
UCCUCGAGG GAAGUUAGGUU
miRNA 3' U 5'
target: AT5G19540.1
miRNA: ath-miR319a
miRNA: ath-miR319a
mfe: -34.3 kcal/mol
p-value: 0.001484
position: 1346
target 5' U U C 3'
GGGAGCUC UCUUUGGUUCGA
CCCUCGAG GGAAGUCAGGUU
miRNA 3' U 5'
target: AT5G19540.1
miRNA: ath-miR319b
miRNA: ath-miR319b
mfe: -34.3 kcal/mol
p-value: 0.003024
position: 1346
target 5' U U C 3'
GGGAGCUC UCUUUGGUUCGA
CCCUCGAG GGAAGUCAGGUU
miRNA 3' U 5'
target: AT5G19540.1
miRNA: ath-miR319c
miRNA: ath-miR319c
mfe: -32.2 kcal/mol
p-value: 0.003491
position: 1346
target 5' U U C 3'
GGGAGCUC UCUUUGGUUCGA
UCCUCGAG GGAAGUCAGGUU
miRNA 3' U 5'
target: AT5G19540.1
miRNA: ath-miR869
miRNA: ath-miR869
mfe: -27.1 kcal/mol
p-value: 0.011622
position: 149
target 5' C C A U 3'
UC GC UAUCUCAAUACCGG
AG UG AUAGAGUUGUGGUC
miRNA 3' C U U 5'
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| Ortholog Group | |
| | Ortholog Groups: OG5_156572 | |
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