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| Locus name | LOC_Os05g08420 |
| Organism | Rice (Oryza sativa) | | Taxonomic identifier | [NCBI] | | Function category | Others:Unknown | | Effect for Senescence | Unclear | | Gene Description | Expressed protein | | Evidence | Molecular evidence:SSH [Ref 1] | | References | 1: Liu L, Zhou Y, Zhou G, Ye R, Zhao L, Li X, Lin YIdentification of early senescence-associated genes in rice flag leaves.Plant Mol. Biol. 2008 May;67(1-2):37-55 | | Sequence | LOC_Os05g08420.1 | Genomic | mRNA | CDS | Protein
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miRNA Interaction  | |
| | Details | | target: LOC_Os05g08420
miRNA: osa-miR1846a-3p
miRNA: osa-miR1846a-3p
mfe: -33.8 kcal/mol
p-value: 0.001316
position: 143
target 5' G A C 3'
CC GCGGGGAGGGCG GGG CG
GG CGCUCCUCUUGC CCC GU
miRNA 3' C A 5'
target: LOC_Os05g08420
miRNA: osa-miR1846a-3p
miRNA: osa-miR1846a-3p
mfe: -33.8 kcal/mol
p-value: 0.001316
position: 263
target 5' G G A C 3'
CGGC GAGGAGAGCG GG CG
GCCG CUCCUCUUGC CC GU
miRNA 3' G C A 5'
target: LOC_Os05g08420
miRNA: osa-miR1846b-3p
miRNA: osa-miR1846b-3p
mfe: -33.8 kcal/mol
p-value: 0.002558
position: 143
target 5' G A C 3'
CC GCGGGGAGGGCG GGG CG
GG CGCUCCUCUUGC CCC GU
miRNA 3' C A 5'
target: LOC_Os05g08420
miRNA: osa-miR1846b-3p
miRNA: osa-miR1846b-3p
mfe: -33.8 kcal/mol
p-value: 0.002558
position: 263
target 5' G G A C 3'
CGGC GAGGAGAGCG GG CG
GCCG CUCCUCUUGC CC GU
miRNA 3' G C A 5'
target: LOC_Os05g08420
miRNA: osa-miR1848
miRNA: osa-miR1848
mfe: -33.8 kcal/mol
p-value: 0.009273
position: 238
target 5' G C U U 3'
GC C CG GCGCCGGCGG GG
CG G GC CGCGGCCGCU CC
miRNA 3' A U C G 5'
target: LOC_Os05g08420
miRNA: osa-miR2096-5p
miRNA: osa-miR2096-5p
mfe: -34.0 kcal/mol
p-value: 0.002778
position: 167
target 5' G G G C G A 3'
CG C G GGGGGAGA CGGCA
GC G C CCCCCUUU GCCGU
miRNA 3' G G U A 5'
target: LOC_Os05g08420
miRNA: osa-miR2103
miRNA: osa-miR2103
mfe: -36.1 kcal/mol
p-value: 0.001702
position: 134
target 5' C U C C C G 3'
CG GCG CG CGCGGGGAGGG GA
GC CGC GC GUGCCUCUCCC UU
miRNA 3' U U 5'
target: LOC_Os05g08420
miRNA: osa-miR2864
miRNA: osa-miR2864
mfe: -26.7 kcal/mol
p-value: 0.031820
position: 149
target 5' G G C 3'
G AGGGCGAGGGC GCGGG
C UUUUGUUCCCG CGUUU
miRNA 3' A G U U 5'
target: LOC_Os05g08420
miRNA: osa-miR816
miRNA: osa-miR816
mfe: -19.3 kcal/mol
p-value: 0.013642
position: 672
target 5' C C A A 3'
UUGUGG GAAGUAUG UGC
AACAUC UUUUAUAC GUG
miRNA 3' C A A 5'
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| Ortholog Group | |
| | Ortholog Groups: OG5_170807 | |
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