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| Locus name | LOC_Os09g19890 |
| Organism | Rice (Oryza sativa) | | Taxonomic identifier | [NCBI] | | Function category | Others:Unknown | | Effect for Senescence | Unclear | | Gene Description | Expressed protein | | Evidence | Molecular evidence:SSH [Ref 1] | | References | 1: Liu L, Zhou Y, Zhou G, Ye R, Zhao L, Li X, Lin YIdentification of early senescence-associated genes in rice flag leaves.Plant Mol. Biol. 2008 May;67(1-2):37-55 | | Sequence | LOC_Os09g19890.1 | Genomic | mRNA | CDS | Protein
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miRNA Interaction  | |
| | Details | | target: LOC_Os09g19890
miRNA: osa-miR1435
miRNA: osa-miR1435
mfe: -17.9 kcal/mol
p-value: 0.075677
position: 255
target 5' U U U U 3'
AAAAAG UUUGAUUU GGGAG
UUUUUC AAACUGAA UCUUU
miRNA 3' U 5'
target: LOC_Os09g19890
miRNA: osa-miR159a
miRNA: osa-miR159a
mfe: -28.5 kcal/mol
p-value: 0.020479
position: 558
target 5' U A 3'
GGAGC CUCUUCG UCCAAG
UCUCG GGGAAGU AGGUUU
miRNA 3' G A U 5'
target: LOC_Os09g19890
miRNA: osa-miR159b
miRNA: osa-miR159b
mfe: -28.5 kcal/mol
p-value: 0.018049
position: 558
target 5' U A 3'
GGAGC CUCUUCG UCCAAG
UCUCG GGGAAGU AGGUUU
miRNA 3' G A U 5'
target: LOC_Os09g19890
miRNA: osa-miR159c
miRNA: osa-miR159c
mfe: -30.8 kcal/mol
p-value: 0.013026
position: 557
target 5' U G 3'
UGGAGC CUCUUCG UCCAA
ACCUCG GGGAAGU AGGUU
miRNA 3' A U A 5'
target: LOC_Os09g19890
miRNA: osa-miR159d
miRNA: osa-miR159d
mfe: -30.2 kcal/mol
p-value: 0.011002
position: 558
target 5' U G 3'
GGAGC CUCUUCG UCCAA
CCUCG GGGAAGU AGGUU
miRNA 3' G A U A 5'
target: LOC_Os09g19890
miRNA: osa-miR159e
miRNA: osa-miR159e
mfe: -29.7 kcal/mol
p-value: 0.011503
position: 558
target 5' U G 3'
GGAGC CUCUUCG UCCAA
CCUCG GGGAAGU AGGUU
miRNA 3' U A U A 5'
target: LOC_Os09g19890
miRNA: osa-miR159f
miRNA: osa-miR159f
mfe: -30.6 kcal/mol
p-value: 0.009118
position: 557
target 5' U A 3'
UGGAGC CUCUUCG UCCAAG
AUCUCG GGGAAGU AGGUUC
miRNA 3' A U 5'
target: LOC_Os09g19890
miRNA: osa-miR1857-5p
miRNA: osa-miR1857-5p
mfe: -26.4 kcal/mol
p-value: 0.045415
position: 1202
target 5' U A C 3'
CCUU UGU UCCAAAGAAACCA
GGAG ACG AGGUUUUUUUGGU
miRNA 3' U 5'
target: LOC_Os09g19890
miRNA: osa-miR319a
miRNA: osa-miR319a
mfe: -30.8 kcal/mol
p-value: 0.013914
position: 558
target 5' U G 3'
GGAGC CUCUUC GUCCAA
CCUCG GGGAAG CAGGUU
miRNA 3' C U U 5'
target: LOC_Os09g19890
miRNA: osa-miR319b
miRNA: osa-miR319b
mfe: -30.8 kcal/mol
p-value: 0.016021
position: 558
target 5' U G 3'
GGAGC CUCUUC GUCCAA
CCUCG GGGAAG CAGGUU
miRNA 3' C U U 5'
target: LOC_Os09g19890
miRNA: osa-miR418
miRNA: osa-miR418
mfe: -21.4 kcal/mol
p-value: 0.032004
position: 540
target 5' U G G 3'
CGUCA U CGUCGUCG GUUG
GCAGU A GUAGUAGU UAAU
miRNA 3' A A G 5'
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| Ortholog Group | |
| | Ortholog Groups: OG5_160375 | |
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