The National Genomics Data Center is in collaboration with partner databases. If you are interested in building any collaboration with us or would like to become our partner, please feel free to contact us. Below is a list of our partner databases.
| Database Name | Description | PMID | Database Commons |
|---|---|---|---|
| AnimalTFDB3 | Animal transcriptional factors database | 30204897 | View |
| BBCancer | BBCancer: an expression atlas of blood-based biomarkers in the early diagnosis of cancers | 31665503 | View |
| CancerSEA | a cancer single-cell state atlas | 30329142 | View |
| CellMarker | a manually curated resource of cell markers in human and mouse | 30289549 | View |
| CGDB | Circadian Gene database | 27789706 | View |
| CGGA | Chinese Glioma Genome Atlas | 33662628 | View |
| circAtlas | an integrated resource of circRNAs | 30893614 | View |
| dbPAF | Database of phospho-sites in Animals and Fungi | 27010073 | View |
| dbPPT | Database of Protein Phosphorylation in Plants | 25534750 | View |
| dbPSP 2.0 | Database of Phosphorylation Sites in Prokaryotes | 32472030 | View |
| DEG | Database of essential genes | 24243843 | View |
| DiseaseEnhancer | a resource of human disease-associated enhancer catalog | 29059320 | View |
| DoriC | Database of replication origin | 30364951 | View |
| DrLLPS | Data resource of liquid-liquid phase separation | 31691822 | View |
| EKPD | Database of Eukaryotic Protein Kinases | 24214991 | View |
| ELMSG | eLMSG (an eLibrary of Microbial Systematics and Genomics) is a web database, which will integrate microbial systematics, genomics, and phenomics (polyphasic taxonomy related phenotypes). | View | |
| EPSD | Eukaryotic Phosphorylation Site Database | 32008039 | View |
| EVmiRNA | EVmiRNA is a database of miRNA profiling in extracellular vesicles | 30335161 | View |
| GenTree | GenTree, the time tree of genes along the evolutionary history | 30862647 | View |
| GTDB | GTDB is an integrated repository of glycosyltransferases, which collects comprehensive information, including amino acid sequences, coding region sequences, available tertiary structures, protein classification families, catalytic reactions and metabolic | 32542364 | View |
| hTFtarget | Targets of human transcription factors and their prediction server | 32858223 | View |
| iEKPD | Integrated annotations for Eukaryotic protein Kinases, protein Phosphatases & phosphoprotein-binding Domains | 30380109 | View |
| iUUCD | Integrated annotations for ubiquitin and ubiquitin-like conjugation database | 29106644 | View |
| LnCAR | lnCAR | A comprehensive resource for lncRNAs from Cancer Arrays | 30786995 | View |
| LncRNADisease | Database for long-non-coding RNA-associated diseases | 30285109 | View |
| lncRNASNP2 | lncRNA and variants database of human and mouse | 29077939 | View |
| MiCroKitS | Midbody, Centrosome, Kinetochore, Telomere and Spindle | 25392421 | View |
| miRNASNP | miRNASNP-v3 is a comprehensive database for SNPs and disease-related variations in miRNAs and miRNA targets", "basicInfo | 25877638 | View |
| PceRBase | Plant competing endogenous RNA Database | 28053167 | View |
| PlantTFDB | Plant Transcription Factor Database | 27924042 | View |
| PLMD | Protein lysine modification database | 28529077 | View |
| PTMD | A database of human disease-associated post-translational modifications | 30244175 | View |
| RhesusBase | Knowledgebase for the Monkey Research Community | 22965133 | View |
| RMVar | Database of functional variants involved in RNA modifications | 29036329 | View |
| SEECancer | a resource for somatic events in evolution of cancer genome | 29069402 | View |
| SEGreg | Specifically expressed genes and their regulations | 29309507 | View |
| THANATOS | The Autophagy, Necrosis, ApopTosis Orchestrators | 29157087 | View |
| WERAM | Eukaryotic Writers, Erasers and Readers protein of Histone Acetylation and Methylation system Database | 27789692 | View |
| ZCURVE_CoVdb | an updated database of annotated protein-coding genes and proteinase cleavage sites in thousands of coronavirus genomes | 12859968 | View |