Partners

The National Genomics Data Center is in collaboration with partner databases. If you are interested in building any collaboration with us or would like to become our partner, please feel free to contact us. Below is a list of our partner databases.

Database Name Description PMID Database Commons
AnimalTFDB3 Animal transcriptional factors database 30204897 View
BBCancer BBCancer: an expression atlas of blood-based biomarkers in the early diagnosis of cancers 31665503 View
CancerSEA a cancer single-cell state atlas 30329142 View
CellMarker a manually curated resource of cell markers in human and mouse 30289549 View
CGDB Circadian Gene database 27789706 View
CGGA Chinese Glioma Genome Atlas 33662628 View
circAtlas an integrated resource of circRNAs 30893614 View
dbPAF Database of phospho-sites in Animals and Fungi 27010073 View
dbPPT Database of Protein Phosphorylation in Plants 25534750 View
dbPSP 2.0 Database of Phosphorylation Sites in Prokaryotes 32472030 View
DEG Database of essential genes 24243843 View
DiseaseEnhancer a resource of human disease-associated enhancer catalog 29059320 View
DoriC Database of replication origin 30364951 View
DrLLPS Data resource of liquid-liquid phase separation 31691822 View
EKPD Database of Eukaryotic Protein Kinases 24214991 View
ELMSG eLMSG (an eLibrary of Microbial Systematics and Genomics) is a web database, which will integrate microbial systematics, genomics, and phenomics (polyphasic taxonomy related phenotypes). View
EPSD Eukaryotic Phosphorylation Site Database 32008039 View
EVmiRNA EVmiRNA is a database of miRNA profiling in extracellular vesicles 30335161 View
GenTree GenTree, the time tree of genes along the evolutionary history 30862647 View
GTDB GTDB is an integrated repository of glycosyltransferases, which collects comprehensive information, including amino acid sequences, coding region sequences, available tertiary structures, protein classification families, catalytic reactions and metabolic 32542364 View
hTFtarget Targets of human transcription factors and their prediction server 32858223 View
iEKPD Integrated annotations for Eukaryotic protein Kinases, protein Phosphatases & phosphoprotein-binding Domains 30380109 View
iUUCD Integrated annotations for ubiquitin and ubiquitin-like conjugation database 29106644 View
LnCAR lnCAR | A comprehensive resource for lncRNAs from Cancer Arrays 30786995 View
LncRNADisease Database for long-non-coding RNA-associated diseases 30285109 View
lncRNASNP2 lncRNA and variants database of human and mouse 29077939 View
MiCroKitS Midbody, Centrosome, Kinetochore, Telomere and Spindle 25392421 View
miRNASNP miRNASNP-v3 is a comprehensive database for SNPs and disease-related variations in miRNAs and miRNA targets", "basicInfo 25877638 View
PceRBase Plant competing endogenous RNA Database 28053167 View
PlantTFDB Plant Transcription Factor Database 27924042 View
PLMD Protein lysine modification database 28529077 View
PTMD A database of human disease-associated post-translational modifications 30244175 View
RhesusBase Knowledgebase for the Monkey Research Community 22965133 View
RMVar Database of functional variants involved in RNA modifications 29036329 View
SEECancer a resource for somatic events in evolution of cancer genome 29069402 View
SEGreg Specifically expressed genes and their regulations 29309507 View
THANATOS The Autophagy, Necrosis, ApopTosis Orchestrators 29157087 View
WERAM Eukaryotic Writers, Erasers and Readers protein of Histone Acetylation and Methylation system Database 27789692 View
ZCURVE_CoVdb an updated database of annotated protein-coding genes and proteinase cleavage sites in thousands of coronavirus genomes 12859968 View