战略伙伴

The National Genomics Data Center is in collaboration with partner databases. If you are interested in building any collaboration with us or would like to become our partner, please feel free to contact us. Below is a list of our partner databases.

Database Name Description Affiliation Database Commons
Animal-APAdb A comprehensive animal alternative polyadenylation database Huazhong Agricultural University View
Animal-eRNAdb A comprehensive animal enhancer RNA database Huazhong Agricultural University View
Animal-SNPAtlas Animal-SNPAtlas: a comprehensive SNP database for multiple animals. Huazhong Agricultural University View
AnimalTFDB Animal Transcription Factor Database Huazhong University of Science and Technology View
BBCancer BBCancer: an expression atlas of blood-based biomarkers in the early diagnosis of cancers Sun Yat-sen University View
CancerSEA CancerSEA: a cancer single-cell state atlas Harbin Medical University View
CellMarker CellMarker: a manually curated resource of cell markers in human and mouse. Harbin Medical University View
CGDB Circadian Gene Database Huazhong University of Science and Technology View
CGGA Chinese Glioma Genome Atlas Capital Medical University View
circAtlas circAtlas 2.0 Beijing Institutes of Life Science View
CPLM database of lysine modifications Huazhong University of Science and Technology View
dbPAF database of Phospho-sites in Animals and Fungi Huazhong University of Science and Technology View
dbPPT database of Phospho-sites in PlanTs Huazhong University of Science and Technology View
dbPSP database of Phosphorylation Sites in Prokaryotes Huazhong University of Science and Technology View
DEG Database of Essential Genes Tianjin University View
DiseaseEnhancer DiseaseEnhancer: a resource of human disease-associated enhancer catalog. Harbin Medical University View
DoriC Database of Replication Origins Tianjin University View
DrLLPS Data resource of liquid-liquid phase separation Huazhong University of Science and Technology View
EKPD Eukaryotic Kinase and Phosphatase Database Huazhong University of Science and Technology View
EPSD Eukaryotic Phosphorylation Site Database Huazhong University of Science and Technology View
EVAtlas In EVAtlas, we performed a unified read dynamic assignment algorithm (RDAA) considering mismatch and multi-mapping reads to quantify the expression profiles of seven ncRNA types (miRNA, snoRNA, piRNA, snRNA, rRNA, tRNA and Y RNA) in more than 2,030 high-q Huazhong University of Science and Technology View
EVmiRNA EVmiRNA is a database of miRNA profiling in extracellular vesicles Huazhong University of Science and Technology View
GenTree GenTree, the time tree of genes along the evolutionary history Institute of Zoology View
hTFtarget In this hTFtarget database, we collected comprehensive human TF ChIP-Seq data and customized an analysis workflow to identify reliable TF targets with taking epigenomic states into account Huazhong University of Science and Technology View
iEKPD Integrated annotations for Eukaryotic protein Kinases, protein Phosphatases & phosphoprotein-binding Domains Huazhong University of Science and Technology View
iPCD database of PCD regulators Huazhong University of Science and Technology View
iUUCD integrated annotations for Ubiquitin and Ubiquitin-like Conjugation Database Huazhong University of Science and Technology View
LeukemiaDB LeukemiaDB collects 3068 samples in 188 leukemia-associated RNA-seq datasets from NCBI GEO and SRA. Huazhong University of Science and Technology View
lnCAR lnCAR | A comprehensive resource for lncRNAs from Cancer Arrays Sun Yat-sen University View
LncRNADisease LncRNA diseases interaction database. Peking University View
lncRNASNP lncRNASNP v3: a comprehensive resources for functional variants in long non-coding RNAs. Huazhong Agricultural University View
lncRNASNP2 A database providing comprehensive resources of single nucleotide polymorphisms (SNPs) in human/mouse lncRNAs. Huazhong University of Science and Technology View
MiCroKiTS Midbody, Centrosome, Kinetochore, Telomere and Spindle Huazhong University of Science and Technology View
miRNASNP miRNASNP-v3 is a comprehensive database for SNPs and disease-related variations in miRNAs and miRNA targets Huazhong University of Science and Technology View
ncRNA-eQTL A database to evaluate the effects of SNPs on ncRNA expression Huazhong Agricultural University View
Pancan-meQTL A database to evaluate the effects of SNPs on methylation. Huazhong Agricultural University View
Pancan-MNVQTLdb A database to evaluate the effects of MNVs on multiple molecular phenotypes Huazhong Agricultural University View
PancanQTL A database to systematically identify cis-eQTLs and trans-eQTLs in 33 cancer types. Huazhong Agricultural University View
PceRBase Plant competing endogenous RNA Database Zhejiang University View
PEA Platelet Expression Atlas (PEA) is a comprehensive expression resource and functional analysis platform for human platelets Huazhong University of Science and Technology View
piRNAdb A manually curated resource of piRNAs, which focused on piRNA function analyses as well as piRNA annotation. Institute of Biophysics View
Plant-ImputeDB Plant-ImputeDB: an integrated multiple plant reference panel database for genotype imputation Huazhong Agricultural University View
PlantTFDB Plant transcription factor database, a portal for the functional and evolutionary study of plant transcription factors Peking University View
PLMD Protein Lysine Modifications Database Huazhong University of Science and Technology
PTMD A database of human disease-associated post-translational modifications Huazhong University of Science and Technology View
RhesusBase Genes A Knowledgebase for Monkey Research Community Peking University View
RMVar RNA Modification associated variants database Sun Yat-sen University View
SEECancer SEECancer: a resource for somatic events in evolution of cancer genome. Harbin Medical University View
SEGreg Database of specifically expressed genes and regulation Huazhong University of Science and Technology View
SNP2APA A database to evaluate the effects of SNPs on APA events Huazhong Agricultural University View
THANATOS THe Autophagy, Necrosis, ApopTosis OrchestratorS Huazhong University of Science and Technology View
VarClear Gene Variation Interpretation Database VarClear
VFDB Virulence Factor Database Chinese Academy of Medical Sciences and Peking Union Medical College View
WERAM Eukaryotic Writers, Erasers and Readers protein of Histone Acetylation and Methylation system Database Huazhong University of Science and Technology View
ZCURVE_CoVdb Database of Essential Genes Tianjin University View